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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009628594.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 323aa MW: 36474.3 Da PI: 6.794 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 69.1 | 6.4e-22 | 135 | 195 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK+ g+++prsYY+C+++ +C+++k ++rs++dp v++it +g H+++ XP_009628594.1 135 DDGYSWRKYGQKDTFGAKYPRSYYQCAHRykqNCEATKYIQRSDDDPYVFKITCKGYHTCK 195 8***************************9999***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.5E-23 | 126 | 196 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 19.657 | 129 | 192 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.57E-21 | 132 | 196 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.7E-28 | 134 | 196 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.6E-20 | 135 | 195 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence Send to blast |
MDFSINPEYN SLINELTQGM EHTKQLRAYL RTVPSTSETT QEVLLQKIIY SYEQSLLILK 60 WSGSTPKSSL PLPPTIGAIE SPSFANGSPK SDDMKRSFIH HPELIDNSKR SKKSQPIWSE 120 EVRVSAESGS EGPIDDGYSW RKYGQKDTFG AKYPRSYYQC AHRYKQNCEA TKYIQRSDDD 180 PYVFKITCKG YHTCKQATTS VLQPTFSLTN RNQHFQNSHS DDKLIGDSFV SPTTHESNYF 240 SVSSNSQMNG FGIVHNLQHS ESYLSDTGIF LNLHHSDSDR TDIFSANTST TSSSVGAEFT 300 GLLGARFDFS IWTKTTNTLQ KDE |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009628594.1 | 0.0 | PREDICTED: probable WRKY transcription factor 53 isoform X1 | ||||
Swissprot | Q9SUP6 | 4e-46 | WRK53_ARATH; Probable WRKY transcription factor 53 | ||||
TrEMBL | M1A560 | 1e-103 | M1A560_SOLTU; Uncharacterized protein | ||||
STRING | PGSC0003DMT400014951 | 1e-102 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1843 | 24 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23810.1 | 2e-44 | WRKY family protein |